Basic Information
Locus ID:
gene-QYE76_030123
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 88076394 | 88086274 | - | gene-QYE76_030123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 90,569.18 Da | 45.19 | 81.84 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 632 | 746 | 1.41428E-44 | - |
| CDD | cd00121 | MATH | 487 | 617 | 2.56717E-15 | IPR002083 |
| Pfam | PF02992 | Transposase family tnp2 | 366 | 467 | 8.6E-50 | IPR004242 |
| Pfam | PF00651 | BTB/POZ domain | 638 | 746 | 4.5E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 496 | 622 | 8.83E-17 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 625 | 748 | 3.14E-29 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 749 | 813 | 9.8E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 490 | 622 | 1.2E-15 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 623 | 745 | 9.0E-34 | IPR011333 |
| SMART | SM00225 | BTB_4 | 646 | 750 | 1.3E-22 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 488 | 617 | 10.827949 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 646 | 713 | 18.306616 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 100 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047073217.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2D2E1 | BTB domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g40773v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |