Basic Information
Locus ID:
gene-QYE76_030112
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 87770314 | 87773816 | + | gene-QYE76_030112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 64,789.53 Da | 41.38 | 76.69 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 151 | 261 | 1.4E-22 | IPR000210 |
| Pfam | PF00098 | Zinc knuckle | 537 | 552 | 1.3E-7 | IPR001878 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 358 | 484 | 1.4E-18 | - |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 526 | 560 | 6.8E-9 | IPR036875 |
| SUPERFAMILY | SSF54695 | POZ domain | 136 | 263 | 2.55E-29 | IPR011333 |
| Gene3D | G3DSA:4.10.60.10 | - | 528 | 562 | 3.8E-8 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 131 | 290 | 1.3E-42 | IPR011333 |
| SMART | SM00225 | BTB_4 | 158 | 265 | 3.1E-24 | IPR000210 |
| SMART | SM00343 | c2hcfinal6 | 536 | 552 | 1.6E-5 | IPR001878 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 158 | 226 | 17.500017 | IPR000210 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 537 | 552 | 11.119688 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 517 | - | - |
Gene Ontology
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_047045060.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A452YKJ9 | CCHC-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0682400.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_018506, gene-QYE76_030112, gene-QYE76_030117 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS7B02G151100.1.cds1 |