Basic Information
Locus ID:
gene-QYE76_029938
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 81292517 | 81300882 | + | gene-QYE76_029938 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 126,633.42 Da | 44.19 | 82.72 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 648 | 689 | 5.80215E-24 | - |
| CDD | cd01989 | STK_N | 2 | 142 | 6.866E-31 | - |
| Pfam | PF04564 | U-box domain | 644 | 696 | 7.5E-11 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 375 | 626 | 1.5E-40 | IPR001245 |
| SUPERFAMILY | SSF57850 | RING/U-box | 632 | 697 | 1.15E-17 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 632 | 1.19E-64 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1043 | 1111 | 1.68E-9 | IPR011009 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 637 | 701 | 4.8E-21 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 635 | 2.3E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1044 | 1112 | 2.5E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 442 | 2.1E-27 | - |
| SMART | SM00504 | Ubox_2 | 647 | 705 | 5.1E-16 | IPR003613 |
| SMART | SM00220 | serkin_6 | 370 | 634 | 9.1E-27 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 643 | 722 | 21.806417 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 634 | 31.679253 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 488 | 500 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 946 | 988 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 961 | 980 | - | - |
| Coils | Coil | Coil | 269 | 313 | - | - |
| Coils | Coil | Coil | 244 | 264 | - | - |
| Coils | Coil | Coil | 321 | 341 | - | - |
| Coils | Coil | Coil | 985 | 1019 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_051203312.1 | U-box domain-containing protein 33-like [Lolium perenne] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0E0M4R7 | RING-type E3 ubiquitin transferase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology