Basic Information
Locus ID:
gene-QYE76_029530
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cytosine-specific methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 67522653 | 67528237 | - | gene-QYE76_029530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 56,554.08 Da | 45.66 | 70.42 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 408 | 470 | 7.2E-15 | IPR001525 |
| Pfam | PF01426 | BAH domain | 183 | 271 | 2.0E-14 | IPR001025 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 297 | 471 | 3.1E-26 | IPR029063 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 272 | 437 | 7.1E-103 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 438 | 490 | 7.1E-103 | - |
| SMART | SM00439 | BAH_4 | 182 | 303 | 5.9E-17 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 182 | 313 | 18.039547 | IPR001025 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 101 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69770.1 | chromomethylase 3. Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. | 0 |
| RefSeq | XP_047042937.1 | DNA (cytosine-5)-methyltransferase 1-like [Lolium rigidum] | 0 |
| Q8LPU5 | DNA (cytosine-5)-methyltransferase 3 OS=Zea mays OX=4577 GN=DMT105 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NJK7 | Chromo domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology