HalophFGD

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Basic Information
Locus ID: gene-QYE76_029274
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: DnaJ molecular chaperone homology domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 59286625 59293683 + gene-QYE76_029274
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.53 60,123.79 Da 35.82 76.64 -0.60
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF57756 Retrovirus zinc finger-like domains 101 130 2.09E-6 IPR036875
Gene3D G3DSA:4.10.60.10 - 102 145 1.8E-5 -
ProSiteProfiles PS50158 Zinc finger CCHC-type profile. 111 126 9.1912 IPR001878
MobiDBLite mobidb-lite consensus disorder prediction 77 101 - -
MobiDBLite mobidb-lite consensus disorder prediction 79 95 - -
MobiDBLite mobidb-lite consensus disorder prediction 468 514 - -
MobiDBLite mobidb-lite consensus disorder prediction 469 484 - -
Coils Coil Coil 41 61 - -
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)
KEGG Pathway
KO Term:
K18626 (trichohyalin)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051212717.1 uncharacterized protein LOC127330604 [Lolium perenne] 0
TrEMBL A0A8R7V3B3 CCHC-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 33 gene-QYE76_000029, gene-QYE76_000961, gene-QYE76_010060 ...
gene-QYE76_011323, gene-QYE76_013544, gene-QYE76_014765, gene-QYE76_014918, gene-QYE76_015413, gene-QYE76_017167, gene-QYE76_017195, gene-QYE76_018378, gene-QYE76_019351, gene-QYE76_019437, gene-QYE76_023366, gene-QYE76_023873, gene-QYE76_024114, gene-QYE76_029274, gene-QYE76_029597, gene-QYE76_031103, gene-QYE76_032119, gene-QYE76_033883, gene-QYE76_035582, gene-QYE76_038949, gene-QYE76_039404, gene-QYE76_041661, gene-QYE76_042025, gene-QYE76_042985, gene-QYE76_048640, gene-QYE76_052538, gene-QYE76_053570, gene-QYE76_059514, gene-QYE76_068946, gene-QYE76_069958
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.