Basic Information
Locus ID:
gene-QYE76_029065
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 52298283 | 52299470 | + | gene-QYE76_029065 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 40,740.56 Da | 41.04 | 100.99 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 1 | 59 | 5.7E-12 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1 | 63 | 9.71E-19 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 103 | 355 | 6.99E-16 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 57 | 1.7E-19 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 58 | 388 | 1.7E-16 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 1 | 54 | 2.9E-12 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 1 | 61 | 24.583967 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_051203933.1 | U-box domain-containing protein 21-like [Lolium perenne] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7V5P5 | RING-type E3 ubiquitin transferase OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology