Basic Information
Locus ID:
gene-QYE76_028897
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Cytosine-specific methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 47355256 | 47362280 | + | gene-QYE76_028897 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 80,844.13 Da | 37.88 | 73.37 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 179 | 284 | 2.2E-11 | IPR001025 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 620 | 681 | 5.8E-15 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 312 | 682 | 3.51E-32 | IPR029063 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 474 | 648 | 8.0E-121 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 273 | 430 | 1.6E-55 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 175 | 272 | 2.2E-25 | IPR043151 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 432 | 701 | 8.0E-121 | - |
| SMART | SM00439 | BAH_4 | 159 | 287 | 2.9E-11 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 160 | 287 | 17.013699 | IPR001025 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 311 | 689 | 22.664568 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 109 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69770.1 | chromomethylase 3. Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. | 0 |
| RefSeq | XP_047096185.1 | DNA (cytosine-5)-methyltransferase 1-like [Lolium rigidum] | 0 |
| Q9AXT8 | DNA (cytosine-5)-methyltransferase 1 OS=Zea mays OX=4577 GN=MET2A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NJK7 | Chromo domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology