Basic Information
Locus ID:
gene-QYE76_028839
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
FAR1 DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 45830584 | 45846836 | + | gene-QYE76_028839 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 153,127.97 Da | 48.76 | 81.28 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10551 | MULE transposase domain | 1287 | 1349 | 3.0E-14 | IPR018289 |
| Pfam | PF00646 | F-box domain | 461 | 505 | 2.8E-8 | IPR001810 |
| Pfam | PF00646 | F-box domain | 412 | 454 | 3.5E-6 | IPR001810 |
| Pfam | PF03101 | FAR1 DNA-binding domain | 1116 | 1192 | 4.4E-13 | IPR004330 |
| Pfam | PF08387 | FBD | 762 | 805 | 1.3E-7 | IPR006566 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 90 | 2.09E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 548 | 756 | 4.47E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 398 | 453 | 1.31E-11 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 459 | 501 | 1.44E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 412 | 452 | 5.5E-6 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 461 | 502 | 8.0E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 541 | 913 | 3.7E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 22 | 61 | 2.2E-5 | - |
| SMART | SM00256 | fbox_2 | 24 | 65 | 1.0E-4 | IPR001810 |
| SMART | SM00256 | fbox_2 | 465 | 505 | 6.4E-6 | IPR001810 |
| SMART | SM00256 | fbox_2 | 416 | 455 | 0.003 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 459 | 495 | 10.080346 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 410 | 465 | 9.338503 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1042 | 1074 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1026 | 1041 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 896 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1012 | 1074 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 931 | 957 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 931 | 956 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 875 | 896 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 0 |
| RefSeq | XP_051185264.1 | protein FAR1-RELATED SEQUENCE 5-like [Lolium perenne] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7QF23 | FBD domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_001999, gene-QYE76_005025, gene-QYE76_011045 ... |