Basic Information
Locus ID:
gene-QYE76_028138
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 24868117 | 24871238 | + | gene-QYE76_028138 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 55,927.28 Da | 49.09 | 59.30 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 162 | 293 | 9.7E-18 | - |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 335 | 375 | 3.98E-6 | IPR036875 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 346 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010233269.1 | uncharacterized protein LOC100838984 [Brachypodium distachyon] | 0 |
| TrEMBL | Q8LN71 | Putative polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0091N21.45 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1953 |
| Poaceae | Lolium multiflorum | 59 | gene-QYE76_000611, gene-QYE76_000731, gene-QYE76_000814 ... |