Basic Information
Locus ID:
gene-QYE76_028106
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter transmembrane region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 23824360 | 23829652 | - | gene-QYE76_028106 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 109,212.38 Da | 42.92 | 77.81 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06222 | RNase_H_like | 888 | 970 | 2.25316E-8 | IPR044730 |
| CDD | cd09272 | RNase_HI_RT_Ty1 | 814 | 889 | 1.56014E-36 | - |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 647 | 726 | 8.0E-12 | IPR013103 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 46 | 84 | 2.5E-6 | IPR029472 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 111 | 245 | 8.1E-20 | - |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 646 | 885 | 1.69E-10 | IPR043502 |
| Gene3D | G3DSA:3.30.420.10 | - | 812 | 975 | 2.7E-5 | IPR036397 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 498 | - | - |
| Coils | Coil | Coil | 230 | 250 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_051201939.1 | uncharacterized protein LOC127315493 [Lolium perenne] | 0 |
| P92519 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1 | 0 | |
| TrEMBL | Q94LQ7 | Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g40800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_002067, gene-QYE76_002068, gene-QYE76_008283 ... |