Basic Information
Locus ID:
gene-QYE76_027974
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 20231124 | 20233188 | - | gene-QYE76_027974 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 60,475.60 Da | 51.70 | 66.67 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 403 | 456 | 1.27855E-7 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 385 | 484 | 2.6E-6 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 289 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039838949.1 | uncharacterized protein LOC120699143 isoform X1 [Panicum virgatum] | 0 |
| TrEMBL | A0A2T8KKS6 | Peptidase A2 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G394900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027960 |
| Poaceae | Lolium multiflorum | 225 | gene-QYE76_000112, gene-QYE76_000237, gene-QYE76_000651 ... |
| Poaceae | Oryza sativa | 1 | ChrSy.fgenesh.mRNA.19 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G009620, Chr05G009630, Chr20G008400 |