Basic Information
Locus ID:
gene-QYE76_027558
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 9068639 | 9069754 | + | gene-QYE76_027558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 40,535.64 Da | 39.52 | 84.47 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 157 | 2.05077E-29 | IPR002083 |
| Pfam | PF00917 | MATH domain | 51 | 154 | 1.3E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 197 | 296 | 4.8E-19 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 189 | 297 | 5.76E-19 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 166 | 3.27E-32 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 299 | 365 | 3.0E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 30 | 159 | 3.3E-31 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 185 | 298 | 2.9E-22 | IPR011333 |
| SMART | SM00225 | BTB_4 | 199 | 297 | 5.9E-17 | IPR000210 |
| SMART | SM00061 | math_3 | 35 | 139 | 7.8E-8 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 199 | 260 | 13.363617 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 156 | 23.075739 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_051202629.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6Z0J0 | BTB domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0016360.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 16 | gene-QYE76_009217, gene-QYE76_027558, gene-QYE76_035563 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500312, Pt_Chr0500313 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G151400, Tel2E01G837900, Tel3E01G112900 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG010120, gene_TRIDC1AG010130 ... |
| Poaceae | Triticum aestivum | 15 | TraesCS1A02G072400.1.cds1, TraesCS1A02G072900.1.cds1 ... |