Basic Information
Locus ID:
gene-QYE76_026863
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 255745640 | 255746128 | + | gene-QYE76_026863 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 16,605.24 Da | 63.16 | 90.06 | 0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 101 | 149 | 2.4E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 97 | 153 | 1.61E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 97 | 152 | 8.9E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 102 | 148 | 6.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 102 | 149 | 12.799091 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G43430.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051196549.1 | E3 ubiquitin-protein ligase EL5-like [Lolium perenne] | 0 |
| Q9FKX5 | NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6Z560 | RING-type E3 ubiquitin transferase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0631650.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_026813, gene-QYE76_026863 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0604586 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG059480, gene_TRIDC6BG070480 |
| Poaceae | Triticum aestivum | 2 | TraesCS6B02G449700.1.cds1, TraesCS6D02G389000.1.cds1 |