halophFGD

Basic Information

Locus ID: gene-QYE76_026848

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: DnaJ molecular chaperone homology domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	255306670	255320902	-	gene-QYE76_026848

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.90	125,423.74 Da	45.01	73.12	-0.55

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd09272	RNase_HI_RT_Ty1	392	459	2.29049E-24	-
Pfam	PF14223	gag-polypeptide of LTR copia-type	186	310	1.5E-15	-
SUPERFAMILY	SSF57756	Retrovirus zinc finger-like domains	349	381	1.82E-6	IPR036875
SUPERFAMILY	SSF55797	PR-1-like	9	56	1.83E-9	IPR035940
Gene3D	G3DSA:3.40.33.10	CAP	4	78	3.0E-6	IPR035940
Gene3D	G3DSA:4.10.60.10	-	350	392	2.0E-5	-
ProSiteProfiles	PS50158	Zinc finger CCHC-type profile.	362	377	8.89451	IPR001878
MobiDBLite	mobidb-lite	consensus disorder prediction	325	354	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	738	776	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	602	639	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	488	506	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	488	554	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	328	342	-	-
Coils	Coil	Coil	292	312	-	-

Gene Ontology

Molecular Function:

GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)

KEGG Pathway

KO Term:

K18626 (trichohyalin)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G50060.1	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein.
RefSeq	XP_051190180.1	uncharacterized protein LOC127303495 [Lolium perenne]
Swiss-Prot	P08299	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1
TrEMBL	A0A453I8F0	CCHC-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	112	gene-QYE76_001277, gene-QYE76_001352, gene-QYE76_001721 ... gene-QYE76_002495, gene-QYE76_003541, gene-QYE76_004443, gene-QYE76_004928, gene-QYE76_004941, gene-QYE76_005807, gene-QYE76_005830, gene-QYE76_005831, gene-QYE76_007803, gene-QYE76_008013, gene-QYE76_009230, gene-QYE76_010006, gene-QYE76_011087, gene-QYE76_011088, gene-QYE76_015340, gene-QYE76_015803, gene-QYE76_015804, gene-QYE76_016532, gene-QYE76_017682, gene-QYE76_017873, gene-QYE76_017875, gene-QYE76_018904, gene-QYE76_020250, gene-QYE76_021804, gene-QYE76_021865, gene-QYE76_023256, gene-QYE76_023756, gene-QYE76_023757, gene-QYE76_025100, gene-QYE76_025581, gene-QYE76_025582, gene-QYE76_026848, gene-QYE76_027131, gene-QYE76_027180, gene-QYE76_027298, gene-QYE76_028784, gene-QYE76_029705, gene-QYE76_030814, gene-QYE76_031025, gene-QYE76_031026, gene-QYE76_032944, gene-QYE76_033725, gene-QYE76_033726, gene-QYE76_035656, gene-QYE76_036097, gene-QYE76_037485, gene-QYE76_037940, gene-QYE76_037941, gene-QYE76_038016, gene-QYE76_039089, gene-QYE76_039328, gene-QYE76_040381, gene-QYE76_040873, gene-QYE76_040944, gene-QYE76_041380, gene-QYE76_041616, gene-QYE76_042404, gene-QYE76_042975, gene-QYE76_043639, gene-QYE76_043915, gene-QYE76_043916, gene-QYE76_044922, gene-QYE76_045526, gene-QYE76_046120, gene-QYE76_046263, gene-QYE76_046264, gene-QYE76_047074, gene-QYE76_047159, gene-QYE76_047736, gene-QYE76_048079, gene-QYE76_048135, gene-QYE76_048136, gene-QYE76_052370, gene-QYE76_052992, gene-QYE76_053032, gene-QYE76_053923, gene-QYE76_054108, gene-QYE76_055394, gene-QYE76_056823, gene-QYE76_057935, gene-QYE76_058184, gene-QYE76_058195, gene-QYE76_059337, gene-QYE76_059369, gene-QYE76_061050, gene-QYE76_061051, gene-QYE76_061199, gene-QYE76_061548, gene-QYE76_062122, gene-QYE76_062123, gene-QYE76_062506, gene-QYE76_062507, gene-QYE76_064177, gene-QYE76_064721, gene-QYE76_065021, gene-QYE76_066602, gene-QYE76_066729, gene-QYE76_066913, gene-QYE76_068003, gene-QYE76_068108, gene-QYE76_068932, gene-QYE76_069271, gene-QYE76_070149, gene-QYE76_070150, gene-QYE76_070245, gene-QYE76_070496, gene-QYE76_071305, gene-QYE76_071506, gene-QYE76_071866