Basic Information
Locus ID:
gene-QYE76_026691
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 250483158 | 250484612 | - | gene-QYE76_026691 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 33,636.26 Da | 53.83 | 78.15 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 9 | 52 | 1.1E-5 | IPR001810 |
| Pfam | PF14299 | Phloem protein 2 | 102 | 290 | 4.7E-33 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 78 | 5.89E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 50 | 3.5E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 6 | 52 | 11.034144 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80110.1 | phloem protein 2-B11. | 0 |
| RefSeq | XP_051191785.1 | F-box protein PP2-B11-like [Lolium perenne] | 0 |
| Q949S5 | F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6GRH1 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0628430.1, HORVU.MOREX.r3.6HG0628490.1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_019544, gene-QYE76_026337, gene-QYE76_026338 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0604258, Pt_Chr0604322 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G692400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG056840, gene_TRIDC6BG066470 |
| Poaceae | Triticum aestivum | 9 | TraesCS3A02G082500.1, TraesCS3B02G097600.1 ... |