Basic Information
Locus ID:
gene-QYE76_026688
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 250390779 | 250391931 | - | gene-QYE76_026688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 35,761.33 Da | 53.51 | 85.09 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 166 | 294 | 2.4E-18 | IPR025886 |
| Pfam | PF00646 | F-box domain | 9 | 50 | 2.9E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 60 | 3.53E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 50 | 2.2E-7 | - |
| SMART | SM00256 | fbox_2 | 12 | 52 | 0.0026 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 6 | 52 | 10.000863 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56250.1 | phloem protein 2-B14. | 0 |
| RefSeq | XP_044955315.1 | F-box protein PP2-B11-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q9C7K0 | F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6Y8F9 | F-box domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_026339, gene-QYE76_026688 |