Basic Information
Locus ID:
gene-QYE76_026662
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
FFAT motif binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 249741485 | 249746534 | + | gene-QYE76_026662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 39,852.79 Da | 37.19 | 84.15 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 260 | 297 | 0.0045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 219 | 255 | 1.2E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 43 | 304 | 1.63E-37 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 38 | 321 | 3.8E-52 | IPR015943 |
| SMART | SM00320 | WD40_4 | 29 | 72 | 96.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 258 | 297 | 0.0024 | IPR001680 |
| SMART | SM00320 | WD40_4 | 214 | 255 | 6.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 170 | 211 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 77 | 114 | 7.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 221 | 257 | 10.390142 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 221 | 264 | 13.616343 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 242 | 256 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047082875.1 | coatomer subunit beta'-2-like isoform X2 [Lolium rigidum] | 0 |
| TrEMBL | A0A3B6FV36 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_026662 |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G1006300, Tel7E01G950300 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC4AG068980, gene_TRIDC6BG007330 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS7A02G544600.1, TraesCS7A02G564900.2 ... |