Basic Information
Locus ID:
gene-QYE76_026351
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 242546139 | 242554293 | - | gene-QYE76_026351 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 88,012.48 Da | 42.79 | 66.39 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 519 | 804 | 9.9285E-63 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 604 | 641 | 7.8E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 688 | 721 | 0.0016 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 771 | 804 | 0.1 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 566 | 597 | 0.014 | IPR001680 |
| Pfam | PF08513 | LisH | 10 | 35 | 1.5E-6 | IPR006594 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 517 | 804 | 1.52E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 510 | 656 | 6.9E-31 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 657 | 804 | 6.7E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 516 | 555 | 0.0074 | IPR001680 |
| SMART | SM00320 | WD40_4 | 558 | 597 | 9.6E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 601 | 641 | 7.9E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 765 | 804 | 8.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 683 | 721 | 6.5E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 644 | 680 | 5.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 724 | 763 | 2.8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 690 | 730 | 8.937796 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 608 | 650 | 11.109979 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 608 | 642 | 8.966513 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 565 | 597 | 11.243651 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 772 | 804 | 12.209223 | - |
| ProSiteProfiles | PS50896 | LIS1 homology (LisH) motif profile. | 8 | 40 | 9.035233 | IPR006594 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 772 | 804 | 13.11507 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 565 | 597 | 9.414692 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 432 | - | - |
| Coils | Coil | Coil | 79 | 99 | - | - |
| Coils | Coil | Coil | 365 | 398 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32700.6 | LEUNIG_homolog. Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG. | 0 |
| RefSeq | XP_047082877.1 | transcriptional corepressor LEUNIG_HOMOLOG-like [Lolium rigidum] | 0 |
| O48847 | Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NX33 | LisH domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology