halophFGD

Basic Information

Locus ID: gene-QYE76_026323

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: gag-polypeptide of LTR copia-type

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	241723121	241726184	-	gene-QYE76_026323

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.77	69,251.34 Da	46.26	75.41	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14223	gag-polypeptide of LTR copia-type	312	445	1.4E-16	-
MobiDBLite	mobidb-lite	consensus disorder prediction	480	498	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	469	501	-	-
Coils	Coil	Coil	52	72	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051211614.1	uncharacterized protein LOC127329110 [Lolium perenne]	0
TrEMBL	A0A8I6YTD0	Retrotran_gag_3 domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	28	gene-QYE76_000512, gene-QYE76_000878, gene-QYE76_001935 ... gene-QYE76_002398, gene-QYE76_006301, gene-QYE76_006739, gene-QYE76_008488, gene-QYE76_009923, gene-QYE76_012656, gene-QYE76_026323, gene-QYE76_026701, gene-QYE76_027204, gene-QYE76_035949, gene-QYE76_036887, gene-QYE76_038322, gene-QYE76_038637, gene-QYE76_038748, gene-QYE76_041476, gene-QYE76_041489, gene-QYE76_048786, gene-QYE76_049548, gene-QYE76_050705, gene-QYE76_052942, gene-QYE76_053115, gene-QYE76_062050, gene-QYE76_063665, gene-QYE76_067788, gene-QYE76_070010