Basic Information
Locus ID:
gene-QYE76_025999
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 231431045 | 231431560 | - | gene-QYE76_025999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 17,831.86 Da | 38.79 | 68.54 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 25 | 171 | 2.57565E-70 | - |
| Pfam | PF00314 | Thaumatin family | 29 | 131 | 2.1E-29 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 171 | 4.58E-50 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 23 | 171 | 5.7E-45 | IPR037176 |
| SMART | SM00205 | tha2 | 25 | 171 | 2.0E-39 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 144 | 1.5E-38 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 130 | 171 | 0.049 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 22 | 171 | 31.808592 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 44 | 53 | 6.9E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 24 | 36 | 6.9E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 113 | 129 | 6.9E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 161 | 170 | 6.9E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 78 | 107 | 6.9E-40 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 66 | 77 | 6.9E-40 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_047051732.1 | thaumatin-like pathogenesis-related protein 1 [Lolium rigidum] | 0 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KCF5 | Thaumatin-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology