Basic Information
Locus ID:
gene-QYE76_025795
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the cullin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 224549123 | 224553121 | + | gene-QYE76_025795 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 104,863.24 Da | 50.66 | 92.46 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00888 | Cullin family | 212 | 811 | 6.4E-74 | IPR001373 |
| Pfam | PF10557 | Cullin protein neddylation domain | 836 | 897 | 3.9E-20 | IPR019559 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 827 | 904 | 3.01E-21 | IPR036390 |
| SUPERFAMILY | SSF74788 | Cullin repeat-like | 205 | 556 | 6.8E-25 | IPR016159 |
| SUPERFAMILY | SSF75632 | Cullin homology domain | 560 | 813 | 3.01E-45 | IPR036317 |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 558 | 664 | 3.9E-12 | - |
| Gene3D | G3DSA:3.30.230.130 | Cullin; Chain C, Domain 2 | 667 | 820 | 1.3E-31 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 335 | 453 | 3.3E-5 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 459 | 557 | 1.5E-8 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 821 | 904 | 6.1E-23 | IPR036388 |
| SMART | SM00182 | cul_2 | 586 | 730 | 6.5E-6 | IPR016158 |
| SMART | SM00884 | Cullin_Nedd8_2 | 832 | 899 | 4.4E-26 | IPR019559 |
| ProSiteProfiles | PS50069 | Cullin family profile. | 559 | 781 | 27.143061 | IPR016158 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G26830.1 | cullin 3. Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. | 0 |
| RefSeq | XP_015636933.1 | cullin-3B [Oryza sativa Japonica Group] | 0 |
| Q9ZVH4 | Cullin-3A OS=Arabidopsis thaliana OX=3702 GN=CUL3A PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9WA81 | CULLIN_2 domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_025795 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G168300 |