Basic Information
Locus ID:
gene-QYE76_025581
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Domain of unknown function (DUF4218)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 217012066 | 217014819 | + | gene-QYE76_025581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 71,278.78 Da | 48.56 | 74.22 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 129 | 202 | 2.4E-9 | IPR004242 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 403 | 506 | 2.5E-33 | IPR025452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 105 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051202093.1 | uncharacterized protein LOC127315663 [Lolium perenne] | 0 |
| TrEMBL | A0A180G0Y8 | Transposon protein, putative, CACTA, En/Spm sub-class (Fragment) OS=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) OX=630390 GN=PTTG_30483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 112 | gene-QYE76_001277, gene-QYE76_001352, gene-QYE76_001721 ... |