Basic Information
Locus ID:
gene-QYE76_025174
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 204151747 | 204164421 | - | gene-QYE76_025174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 77,131.07 Da | 49.57 | 83.46 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 276 | 366 | 9.7E-10 | IPR005162 |
| Pfam | PF00646 | F-box domain | 14 | 54 | 1.8E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 69 | 4.71E-13 | IPR036047 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 475 | 529 | 9.34E-9 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 415 | 508 | 1.4E-6 | IPR043128 |
| Gene3D | G3DSA:1.20.1280.50 | - | 14 | 51 | 2.0E-8 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 4.8E-7 | IPR001810 |
| Coils | Coil | Coil | 581 | 615 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19940.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051192882.1 | F-box protein At5g07610-like isoform X2 [Lolium perenne] | 0 |
| O49421 | F-box protein At4g19940 OS=Arabidopsis thaliana OX=3702 GN=At4g19940 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B5Z3J3 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_004914, gene-QYE76_025174, gene-QYE76_033823 |