HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_025100
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 202190219 202193462 - gene-QYE76_025100
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.47 40,872.83 Da 47.69 66.64 -0.80
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13952 Domain of unknown function (DUF4216) 137 204 5.7E-8 IPR025312
Coils Coil Coil 297 324 - -
KEGG Pathway
KO Term:
K00430 (peroxidase [EC:1.11.1.7])
Pathway:
ko00940 (Phenylpropanoid biosynthesis) map00940 (Phenylpropanoid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)
Reaction:
R00602 (Methanol + Hydrogen peroxide <=> Formaldehyde + 2 H2O) R02596 (Coniferyl alcohol <=> Guaiacyl lignin) R03919 (Sinapyl alcohol <=> Syringyl lignin) R04007 (4-Coumaryl alcohol <=> p-Hydroxyphenyl lignin) R07443 (5-Hydroxyconiferyl alcohol <=> 5-Hydroxy-guaiacyl lignin)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051202093.1 uncharacterized protein LOC127315663 [Lolium perenne] 0
TrEMBL A0A0L0UP47 DUF4216 domain-containing protein OS=Puccinia striiformis f. sp. tritici PST-78 OX=1165861 GN=PSTG_18060 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 112 gene-QYE76_001277, gene-QYE76_001352, gene-QYE76_001721 ...
gene-QYE76_002495, gene-QYE76_003541, gene-QYE76_004443, gene-QYE76_004928, gene-QYE76_004941, gene-QYE76_005807, gene-QYE76_005830, gene-QYE76_005831, gene-QYE76_007803, gene-QYE76_008013, gene-QYE76_009230, gene-QYE76_010006, gene-QYE76_011087, gene-QYE76_011088, gene-QYE76_015340, gene-QYE76_015803, gene-QYE76_015804, gene-QYE76_016532, gene-QYE76_017682, gene-QYE76_017873, gene-QYE76_017875, gene-QYE76_018904, gene-QYE76_020250, gene-QYE76_021804, gene-QYE76_021865, gene-QYE76_023256, gene-QYE76_023756, gene-QYE76_023757, gene-QYE76_025100, gene-QYE76_025581, gene-QYE76_025582, gene-QYE76_026848, gene-QYE76_027131, gene-QYE76_027180, gene-QYE76_027298, gene-QYE76_028784, gene-QYE76_029705, gene-QYE76_030814, gene-QYE76_031025, gene-QYE76_031026, gene-QYE76_032944, gene-QYE76_033725, gene-QYE76_033726, gene-QYE76_035656, gene-QYE76_036097, gene-QYE76_037485, gene-QYE76_037940, gene-QYE76_037941, gene-QYE76_038016, gene-QYE76_039089, gene-QYE76_039328, gene-QYE76_040381, gene-QYE76_040873, gene-QYE76_040944, gene-QYE76_041380, gene-QYE76_041616, gene-QYE76_042404, gene-QYE76_042975, gene-QYE76_043639, gene-QYE76_043915, gene-QYE76_043916, gene-QYE76_044922, gene-QYE76_045526, gene-QYE76_046120, gene-QYE76_046263, gene-QYE76_046264, gene-QYE76_047074, gene-QYE76_047159, gene-QYE76_047736, gene-QYE76_048079, gene-QYE76_048135, gene-QYE76_048136, gene-QYE76_052370, gene-QYE76_052992, gene-QYE76_053032, gene-QYE76_053923, gene-QYE76_054108, gene-QYE76_055394, gene-QYE76_056823, gene-QYE76_057935, gene-QYE76_058184, gene-QYE76_058195, gene-QYE76_059337, gene-QYE76_059369, gene-QYE76_061050, gene-QYE76_061051, gene-QYE76_061199, gene-QYE76_061548, gene-QYE76_062122, gene-QYE76_062123, gene-QYE76_062506, gene-QYE76_062507, gene-QYE76_064177, gene-QYE76_064721, gene-QYE76_065021, gene-QYE76_066602, gene-QYE76_066729, gene-QYE76_066913, gene-QYE76_068003, gene-QYE76_068108, gene-QYE76_068932, gene-QYE76_069271, gene-QYE76_070149, gene-QYE76_070150, gene-QYE76_070245, gene-QYE76_070496, gene-QYE76_071305, gene-QYE76_071506, gene-QYE76_071866
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.