Basic Information
Locus ID:
gene-QYE76_024966
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 198780103 | 198781452 | + | gene-QYE76_024966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 48,366.57 Da | 46.31 | 103.70 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 46 | 86 | 1.16616E-21 | - |
| Pfam | PF04564 | U-box domain | 42 | 113 | 1.4E-20 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 38 | 115 | 7.07E-28 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 204 | 439 | 9.6E-20 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 41 | 114 | 7.7E-29 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 132 | 440 | 4.1E-18 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 45 | 108 | 7.0E-31 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 41 | 115 | 32.032043 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_051192764.1 | U-box domain-containing protein 21-like [Lolium perenne] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | F2EI93 | RING-type E3 ubiquitin transferase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology