Basic Information
Locus ID:
gene-QYE76_024935
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 197377886 | 197380198 | - | gene-QYE76_024935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 84,979.74 Da | 40.54 | 81.23 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 419 | 539 | 1.42978E-11 | IPR002083 |
| CDD | cd00121 | MATH | 27 | 161 | 6.41224E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 572 | 646 | 5.7E-17 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 198 | 322 | 1.1E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 416 | 545 | 5.07E-15 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 163 | 7.52E-8 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 192 | 321 | 1.57E-24 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 565 | 709 | 1.82E-21 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 325 | 405 | 7.6E-11 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 25 | 164 | 1.1E-7 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 183 | 324 | 4.4E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 406 | 548 | 2.9E-11 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 553 | 740 | 2.3E-34 | IPR011333 |
| SMART | SM00225 | BTB_4 | 202 | 323 | 2.3E-20 | IPR000210 |
| SMART | SM00225 | BTB_4 | 582 | 710 | 1.3E-18 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 418 | 539 | 8.501124 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 582 | 647 | 16.465918 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 202 | 269 | 17.21047 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 357 | 377 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_047079930.1 | uncharacterized protein LOC124690611 [Lolium rigidum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | E2CZH0 | BTB-domain containing protein OS=Triticum turgidum subsp. durum OX=4567 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9BG0712650 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0219660.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 12 | gene-QYE76_000351, gene-QYE76_018036, gene-QYE76_020460 ... |
| Poaceae | Puccinellia tenuiflora | 8 | Pt_Chr0100491, Pt_Chr0106602, Pt_Chr0206622, Pt_Chr0206755 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G840100 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG009110, gene_TRIDC3AG071980 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS3A02G009700.1.cds1, TraesCS3A02G076600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb418740_P001 |