Basic Information
Locus ID:
gene-QYE76_024886
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
MSP (Major sperm protein) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 195862832 | 195871739 | - | gene-QYE76_024886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 87,905.10 Da | 54.31 | 60.46 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54171 | DNA-binding domain | 10 | 56 | 6.54E-10 | IPR016177 |
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain | 10 | 64 | 5.9E-11 | IPR036955 |
| SMART | SM00380 | rav1_2 | 10 | 70 | 1.9E-9 | IPR001471 |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. | 10 | 69 | 14.183337 | IPR001471 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 677 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 797 | - | - |
| Coils | Coil | Coil | 135 | 165 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G43160.1 | related to AP2 6. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily. | 0 |
| RefSeq | XP_051221053.1 | uncharacterized protein LOC127339216 [Lolium perenne] | 0 |
| TrEMBL | M8BFX2 | Putative cysteine-rich receptor-like protein kinase 39 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |