Basic Information
Locus ID:
gene-QYE76_024787
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Plant mobile domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 192205210 | 192207393 | - | gene-QYE76_024787 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 65,048.08 Da | 50.38 | 76.95 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 220 | 540 | 7.0E-53 | IPR019557 |
| Pfam | PF03108 | MuDR family transposase | 55 | 118 | 2.5E-8 | IPR004332 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48120.1 | hydrolases;protein serine/threonine phosphatases. | 0 |
| RefSeq | XP_051210854.1 | uncharacterized protein LOC127328284 [Lolium perenne] | 0 |
| Q9LNG5 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FHV2 | PMD domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 40 | gene-QYE76_003106, gene-QYE76_004905, gene-QYE76_007129 ... |
| Poaceae | Oryza coarctata | 1 | Oco04G018420 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG047900 |