Basic Information
Locus ID:
gene-QYE76_024608
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 185568176 | 185576679 | + | gene-QYE76_024608 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 63,623.82 Da | 56.18 | 64.37 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 184 | 230 | 4.0E-9 | IPR013103 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 265 | - | - |
| Coils | Coil | Coil | 583 | 584 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040254206.1 | uncharacterized protein LOC120972760 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A453FTH4 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1953 |
| Poaceae | Lolium multiflorum | 59 | gene-QYE76_000611, gene-QYE76_000731, gene-QYE76_000814 ... |