Basic Information
Locus ID:
gene-QYE76_024598
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 185361584 | 185363386 | + | gene-QYE76_024598 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 51,757.35 Da | 46.33 | 73.26 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 173 | 445 | 9.85727E-46 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 410 | 445 | 7.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 322 | 360 | 0.0056 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 271 | 306 | 1.0E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 190 | 248 | 1.1E-6 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 165 | 445 | 2.47E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 99 | 448 | 7.8E-126 | IPR015943 |
| SMART | SM00320 | WD40_4 | 225 | 263 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 267 | 306 | 6.5E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 183 | 222 | 1.4E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 406 | 445 | 8.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 363 | 403 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 318 | 360 | 2.0E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 274 | 315 | 14.719144 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 274 | 308 | 11.708317 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 190 | 231 | 12.01227 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 190 | 227 | 8.808332 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 413 | 446 | 12.714052 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 413 | 446 | 10.574686 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 293 | 307 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 432 | 446 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_051193166.1 | cell division cycle 20.2, cofactor of APC complex-like [Lolium perenne] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PP37 | ANAPC4_WD40 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology