Basic Information
Locus ID:
gene-QYE76_024478
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 179950993 | 179952126 | + | gene-QYE76_024478 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 40,463.84 Da | 61.99 | 58.52 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 165 | 208 | 8.70587E-17 | - |
| Pfam | PF13639 | Ring finger domain | 165 | 208 | 3.8E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 153 | 214 | 5.55E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 141 | 214 | 1.4E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 166 | 207 | 2.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 166 | 208 | 12.607302 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 377 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03550.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047077757.1 | E3 ubiquitin-protein ligase Os04g0590900-like [Lolium rigidum] | 0 |
| Q7XLY8 | E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7UVS3 | RING-type E3 ubiquitin transferase OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology