Basic Information
Locus ID:
gene-QYE76_024409
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DWNN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 177987745 | 177988599 | - | gene-QYE76_024409 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 30,314.72 Da | 55.44 | 67.36 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16620 | vRING-HC-C4C4_RBBP6 | 249 | 281 | 2.67645E-9 | - |
| Pfam | PF08783 | DWNN domain | 84 | 120 | 3.7E-8 | IPR014891 |
| Pfam | PF13696 | Zinc knuckle | 201 | 220 | 2.8E-9 | IPR025829 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 197 | 223 | 7.06E-5 | IPR036875 |
| SUPERFAMILY | SSF57850 | RING/U-box | 242 | 281 | 6.71E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 244 | 284 | 3.5E-6 | IPR013083 |
| Gene3D | G3DSA:4.10.60.10 | - | 199 | 243 | 5.4E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 79 | 123 | 9.8E-8 | - |
| SMART | SM01180 | DWNN_2 | 75 | 121 | 0.0081 | IPR014891 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 160 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47430.3 | DWNN domain, a CCHC-type zinc finger. | 0 |
| RefSeq | XP_047080378.1 | E3 ubiquitin ligase PQT3-like [Lolium rigidum] | 0 |
| B9DFV2 | E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana OX=3702 GN=At5g47430 PE=1 SV=1 | 0 | |
| TrEMBL | F2E1Q0 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology