Basic Information
Locus ID:
gene-QYE76_024398
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 177430508 | 177431892 | - | gene-QYE76_024398 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 33,556.08 Da | 60.08 | 85.32 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 106 | 293 | 5.8E-37 | IPR025886 |
| Pfam | PF12937 | F-box-like | 12 | 54 | 4.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 112 | 2.99E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 130 | 4.3E-8 | - |
| SMART | SM00256 | fbox_2 | 14 | 54 | 0.0043 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 54 | 10.716211 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80110.1 | phloem protein 2-B11. | 0 |
| RefSeq | XP_024317243.1 | putative F-box protein PP2-B12 [Brachypodium distachyon] | 0 |
| Q949S5 | F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3IM09 | F-box domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g55012v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_024347, gene-QYE76_024397, gene-QYE76_024398 |