halophFGD

Basic Information

Locus ID: gene-QYE76_024287

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: helicase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	173222192	173223876	-	gene-QYE76_024287

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.01	56,061.78 Da	53.60	100.28	-0.12

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	34	67	2.6E-4	IPR001810
SUPERFAMILY	SSF81383	F-box domain	31	71	1.44E-6	IPR036047
SUPERFAMILY	SSF52047	RNI-like	192	376	1.49E-11	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	166	464	2.3E-10	IPR032675
ProSiteProfiles	PS50181	F-box domain profile.	32	68	9.232525	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G56420.1	F-box/RNI-like/FBD-like domains-containing protein.
RefSeq	XP_047082287.1	uncharacterized protein LOC124692890 isoform X1 [Lolium rigidum]
Swiss-Prot	Q9FM89	F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana OX=3702 GN=At5g56420 PE=2 SV=1
TrEMBL	I1H5C6	F-box domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100828627 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	6	BH07.3820, BH07.3821, CH07.3879, CH07.3880, CH07.3882 ... CH09.1689
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0151080, gene-QOZ80_4AG0313050 ... gene-QOZ80_8AG0615000, gene-QOZ80_8AG0615050
Poaceae	Hordeum vulgare	38	HORVU.MOREX.r3.1HG0025200.1, HORVU.MOREX.r3.2HG0105200.1 ... HORVU.MOREX.r3.2HG0114700.1, HORVU.MOREX.r3.2HG0114880.1, HORVU.MOREX.r3.2HG0168360.1.CDS1, HORVU.MOREX.r3.2HG0168370.1, HORVU.MOREX.r3.4HG0334320.1, HORVU.MOREX.r3.6HG0558490.1.CDS1, HORVU.MOREX.r3.6HG0558500.1, HORVU.MOREX.r3.6HG0565400.1, HORVU.MOREX.r3.6HG0569940.1, HORVU.MOREX.r3.6HG0595870.1, HORVU.MOREX.r3.6HG0595890.1.CDS1, HORVU.MOREX.r3.6HG0597570.1, HORVU.MOREX.r3.6HG0597580.1, HORVU.MOREX.r3.6HG0617540.1, HORVU.MOREX.r3.6HG0617560.1, HORVU.MOREX.r3.6HG0621060.1, HORVU.MOREX.r3.6HG0623530.1, HORVU.MOREX.r3.6HG0624120.1, HORVU.MOREX.r3.6HG0624130.1, HORVU.MOREX.r3.6HG0624150.1, HORVU.MOREX.r3.6HG0624160.1, HORVU.MOREX.r3.6HG0624180.1, HORVU.MOREX.r3.6HG0624200.1, HORVU.MOREX.r3.6HG0626380.1, HORVU.MOREX.r3.6HG0630270.1, HORVU.MOREX.r3.6HG0630280.1, HORVU.MOREX.r3.6HG0630340.1, HORVU.MOREX.r3.6HG0630680.1, HORVU.MOREX.r3.6HG0631830.1, HORVU.MOREX.r3.6HG0631850.1, HORVU.MOREX.r3.6HG0631900.1, HORVU.MOREX.r3.6HG0631930.1, HORVU.MOREX.r3.6HG0631940.1.CDS1, HORVU.MOREX.r3.6HG0631950.1, HORVU.MOREX.r3.7HG0670060.1, HORVU.MOREX.r3.7HG0670080.1
Poaceae	Lolium multiflorum	45	gene-QYE76_004096, gene-QYE76_007517, gene-QYE76_012696 ... gene-QYE76_017907, gene-QYE76_019078, gene-QYE76_024287, gene-QYE76_026112, gene-QYE76_026355, gene-QYE76_026528, gene-QYE76_026531, gene-QYE76_026876, gene-QYE76_026877, gene-QYE76_026878, gene-QYE76_026879, gene-QYE76_026882, gene-QYE76_026883, gene-QYE76_026884, gene-QYE76_026885, gene-QYE76_026886, gene-QYE76_026889, gene-QYE76_026892, gene-QYE76_026895, gene-QYE76_026898, gene-QYE76_027942, gene-QYE76_035244, gene-QYE76_035445, gene-QYE76_035871, gene-QYE76_035874, gene-QYE76_037144, gene-QYE76_037772, gene-QYE76_037773, gene-QYE76_037775, gene-QYE76_037776, gene-QYE76_040454, gene-QYE76_045612, gene-QYE76_048345, gene-QYE76_049668, gene-QYE76_049690, gene-QYE76_052107, gene-QYE76_055844, gene-QYE76_055845, gene-QYE76_056792, gene-QYE76_058492, gene-QYE76_069059, gene-QYE76_071113
Poaceae	Oryza coarctata	8	Oco03G025920, Oco03G025960, Oco04G026270, Oco04G026400 ... Oco04G026440, Oco04G026450, Oco07G008910, Oco08G008850
Poaceae	Oryza sativa	18	LOC_Os02g48300.1, LOC_Os02g54550.1, LOC_Os02g55050.1 ... LOC_Os02g57860.1, LOC_Os02g57870.1, LOC_Os02g57880.1, LOC_Os02g57890.1, LOC_Os02g57910.1, LOC_Os02g57940.1, LOC_Os02g57960.1, LOC_Os02g57965.1, LOC_Os02g58040.1, LOC_Os04g40760.1, LOC_Os04g40770.1, LOC_Os04g40780.1, LOC_Os04g40800.1, LOC_Os04g40960.1, LOC_Os05g01630.1
Poaceae	Paspalum vaginatum	2	gene-BS78_07G197900, gene-BS78_K113400
Poaceae	Puccinellia tenuiflora	43	Pt_Chr0101770, Pt_Chr0107087, Pt_Chr0107530, Pt_Chr0200849 ... Pt_Chr0202928, Pt_Chr0202963, Pt_Chr0202967, Pt_Chr0206868, Pt_Chr0305396, Pt_Chr0305398, Pt_Chr0307231, Pt_Chr0400814, Pt_Chr0400815, Pt_Chr0400816, Pt_Chr0400817, Pt_Chr0601234, Pt_Chr0603652, Pt_Chr0604297, Pt_Chr0604354, Pt_Chr0604439, Pt_Chr0604447, Pt_Chr0604448, Pt_Chr0604510, Pt_Chr0604605, Pt_Chr0604606, Pt_Chr0604627, Pt_Chr0604687, Pt_Chr0604696, Pt_Chr0604701, Pt_Chr0604706, Pt_Chr0604731, Pt_Chr0604737, Pt_Chr0604739, Pt_Chr0604744, Pt_Chr0604868, Pt_Chr0605582, Pt_Chr0605674, Pt_Chr0605677, Pt_Chr0605679, Pt_Chr0605681, Pt_Chr0605683, Pt_Chr0704415, Pt_Ctg00197
Poaceae	Thinopyrum elongatum	31	Tel2E01G143700, Tel2E01G143800, Tel2E01G563900 ... Tel2E01G595100, Tel2E01G942600, Tel2E01G943300, Tel3E01G455800, Tel3E01G455900, Tel5E01G002500, Tel5E01G559800, Tel6E01G136100, Tel6E01G136500, Tel6E01G254500, Tel6E01G265100, Tel6E01G285500, Tel6E01G311500, Tel6E01G566900, Tel6E01G636100, Tel6E01G636300, Tel6E01G716300, Tel6E01G716500, Tel6E01G716600, Tel6E01G716700, Tel6E01G717200, Tel6E01G717600, Tel6E01G749400, Tel6E01G750100, Tel6E01G751000, Tel7E01G429800, Tel7E01G430000, Tel7E01G717600
Poaceae	Triticum dicoccoides	54	gene_TRIDC1AG009610, gene_TRIDC1BG012920 ... gene_TRIDC2AG047050, gene_TRIDC2AG056290, gene_TRIDC2BG084660, gene_TRIDC3BG026460, gene_TRIDC3BG046280, gene_TRIDC4AG059300, gene_TRIDC5AG009660, gene_TRIDC5AG031100, gene_TRIDC5BG009830, gene_TRIDC5BG013230, gene_TRIDC5BG031390, gene_TRIDC6AG006830, gene_TRIDC6AG015090, gene_TRIDC6AG017380, gene_TRIDC6AG018230, gene_TRIDC6AG020090, gene_TRIDC6AG020990, gene_TRIDC6AG048000, gene_TRIDC6AG051070, gene_TRIDC6AG051110, gene_TRIDC6AG053650, gene_TRIDC6AG058480, gene_TRIDC6AG058490, gene_TRIDC6AG058500, gene_TRIDC6AG058510, gene_TRIDC6AG058540, gene_TRIDC6AG058860, gene_TRIDC6AG059710, gene_TRIDC6BG009700, gene_TRIDC6BG026850, gene_TRIDC6BG055250, gene_TRIDC6BG056000, gene_TRIDC6BG059830, gene_TRIDC6BG059880, gene_TRIDC6BG062520, gene_TRIDC6BG062590, gene_TRIDC6BG069340, gene_TRIDC6BG069380, gene_TRIDC6BG069400, gene_TRIDC6BG069410, gene_TRIDC6BG070690, gene_TRIDC6BG070710, gene_TRIDC6BG070730, gene_TRIDC6BG070740, gene_TRIDC6BG070760, gene_TRIDC6BG070850, gene_TRIDC6BG070860, gene_TRIDC6BG070870, gene_TRIDC6BG070880, gene_TRIDC7AG031140, gene_TRIDC7AG060020, gene_TRIDC7BG052800
Poaceae	Triticum aestivum	130	TraesCS1A02G069800.1, TraesCS1B02G088100.1 ... TraesCS1B02G091100.2, TraesCS2A02G064500.1, TraesCS2A02G342200.2, TraesCS2A02G344700.1, TraesCS2A02G390300.3, TraesCS2B02G242700.1, TraesCS2B02G361600.1, TraesCS2D02G320100.3, TraesCS2D02G320400.3, TraesCS2D02G323200.1, TraesCS2D02G388300.1, TraesCS2D02G554600.1, TraesCS3B02G184000.2, TraesCS3B02G310200.1, TraesCS3B02G360200.1, TraesCS3B02G439300.1, TraesCS3D02G323600.1, TraesCS3D02G401000.1, TraesCS4A02G289800.1, TraesCS4A02G383200.1, TraesCS4B02G024600.1, TraesCS5A02G062000.1, TraesCS5A02G192600.1, TraesCS5B02G059500.1, TraesCS5B02G059600.1, TraesCS5B02G080800.2, TraesCS5B02G181000.1, TraesCS5B02G181100.1, TraesCS5B02G351400.1, TraesCS5D02G356400.1, TraesCS6A02G129200.1, TraesCS6A02G129300.1, TraesCS6A02G135400.1, TraesCS6A02G146300.2, TraesCS6A02G319400.1, TraesCS6A02G340700.1, TraesCS6A02G341200.1, TraesCS6A02G358200.1, TraesCS6A02G358300.1, TraesCS6A02G396600.1, TraesCS6A02G396700.1, TraesCS6A02G396800.1, TraesCS6A02G396900.1, TraesCS6A02G397000.1, TraesCS6A02G397400.1, TraesCS6A02G397500.1, TraesCS6A02G397600.1, TraesCS6A02G397700.1, TraesCS6A02G400400.1, TraesCS6A02G406800.2, TraesCS6A02G406900.1, TraesCS6A02G407000.1, TraesCS6A02G407100.1, TraesCS6A02G407600.1, TraesCS6A02G407800.1, TraesCS6A02G407900.2, TraesCS6A02G408000.1, TraesCS6A02G408100.1, TraesCS6B02G073800.1, TraesCS6B02G112600.1, TraesCS6B02G142200.1, TraesCS6B02G143900.1, TraesCS6B02G157500.1, TraesCS6B02G163400.1, TraesCS6B02G179300.2, TraesCS6B02G344800.1, TraesCS6B02G349900.1, TraesCS6B02G372200.1, TraesCS6B02G372500.1, TraesCS6B02G390700.1, TraesCS6B02G390800.1, TraesCS6B02G390900.1, TraesCS6B02G391000.1, TraesCS6B02G436600.1, TraesCS6B02G436900.1, TraesCS6B02G437000.2, TraesCS6B02G437100.1, TraesCS6B02G437200.1, TraesCS6B02G437500.1, TraesCS6B02G440700.1, TraesCS6B02G451500.1, TraesCS6B02G451600.1, TraesCS6B02G451700.1, TraesCS6B02G451800.1, TraesCS6B02G451900.1, TraesCS6B02G452000.1, TraesCS6B02G452200.1, TraesCS6B02G452300.1, TraesCS6B02G452400.1, TraesCS6B02G452600.1, TraesCS6B02G452900.1, TraesCS6B02G453000.1, TraesCS6B02G453100.1, TraesCS6B02G453200.1, TraesCS6B02G453300.1, TraesCS6B02G453500.1, TraesCS6B02G453700.1, TraesCS6B02G453800.1, TraesCS6B02G453900.1, TraesCS6B02G454000.1, TraesCS6D02G104900.1, TraesCS6D02G124500.2, TraesCS6D02G141200.3, TraesCS6D02G304700.1, TraesCS6D02G321400.2, TraesCS6D02G340800.1, TraesCS6D02G340900.1, TraesCS6D02G341000.1, TraesCS6D02G341100.1, TraesCS6D02G381400.1, TraesCS6D02G381500.1, TraesCS6D02G381700.1, TraesCS6D02G381800.2, TraesCS6D02G384600.1, TraesCS6D02G390300.1, TraesCS6D02G390600.1, TraesCS6D02G390800.1, TraesCS6D02G391000.1, TraesCS6D02G391100.1, TraesCS6D02G391500.1, TraesCS6D02G391700.1, TraesCS6D02G391800.1, TraesCS6D02G391900.1, TraesCS7A02G084700.1, TraesCS7A02G243600.1, TraesCS7B02G329700.1, TraesCS7D02G421700.1, TraesCSU02G141900.1
Poaceae	Zoysia japonica	1	nbis-gene-8304
Poaceae	Zoysia macrostachya	2	Zma_g14714, Zma_g14715