HalophFGD

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Basic Information
Locus ID: gene-QYE76_024200
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: FBD
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 169505494 169511141 - gene-QYE76_024200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.03 41,372.25 Da 52.43 90.47 -0.55
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 25 67 6.6E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 11 65 3.27E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 25 65 1.1E-6 -
SMART SM00256 fbox_2 29 68 0.003 IPR001810
ProSiteProfiles PS50181 F-box domain profile. 23 78 9.338503 IPR001810
MobiDBLite mobidb-lite consensus disorder prediction 303 359 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 22 - -
MobiDBLite mobidb-lite consensus disorder prediction 307 359 - -
Coils Coil Coil 270 311 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G02910.2 F-box/RNI-like superfamily protein. 0
RefSeq XP_047058456.1 L-type lectin-domain containing receptor kinase IX.1-like [Lolium rigidum] 0
Swiss-Prot Q9LYZ4 F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1 0
TrEMBL A0A7H4LDG3 Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS1251 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 25 gene-QYE76_001194, gene-QYE76_003999, gene-QYE76_004100 ...
gene-QYE76_006746, gene-QYE76_009728, gene-QYE76_015014, gene-QYE76_015913, gene-QYE76_022086, gene-QYE76_023305, gene-QYE76_024200, gene-QYE76_030950, gene-QYE76_031355, gene-QYE76_031593, gene-QYE76_031864, gene-QYE76_033648, gene-QYE76_040280, gene-QYE76_041200, gene-QYE76_041870, gene-QYE76_046095, gene-QYE76_052207, gene-QYE76_064917, gene-QYE76_065139, gene-QYE76_065533, gene-QYE76_067112, gene-QYE76_068192
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.