Basic Information
Locus ID:
gene-QYE76_023973
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
UBA-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 160246447 | 160248033 | + | gene-QYE76_023973 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 58,324.20 Da | 41.52 | 71.67 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02958 | UAS | 250 | 368 | 1.78802E-36 | - |
| CDD | cd14273 | UBA_TAP-C_like | 13 | 44 | 6.00644E-7 | - |
| Pfam | PF14555 | UBA-like domain | 9 | 46 | 1.7E-9 | - |
| Pfam | PF13899 | Thioredoxin-like | 255 | 339 | 6.4E-9 | - |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 440 | 525 | 4.65E-7 | IPR029071 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 230 | 369 | 7.83E-24 | IPR036249 |
| Gene3D | G3DSA:1.10.8.10 | - | 4 | 48 | 1.7E-6 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 252 | 369 | 1.3E-26 | - |
| SMART | SM00594 | 45neu3 | 238 | 363 | 3.9E-9 | IPR006577 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 443 | 525 | 12.048233 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 207 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14570.3 | UBX domain-containing protein. | 0 |
| RefSeq | XP_051196281.1 | putative plant UBX domain-containing protein 14 [Lolium perenne] | 0 |
| P0DKI4 | Putative plant UBX domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUX14 PE=5 SV=1 | 0 | |
| TrEMBL | A0A3B6NS21 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.861, AH07.2773, BH03.985, BH07.2584, CH07.2650 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0138910, gene-QOZ80_2BG0194560 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0117420.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007415, gene-QYE76_023963, gene-QYE76_023966 ... |
| Poaceae | Oryza coarctata | 3 | Oco04G017190, Oco13G005150, Oco14G006110 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g42800.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G208100 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G013060, Chr09G024940, Chr09G024970, Chr15G015460 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG020080, gene_TRIDC6AG036470 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G133200.1.cds1, TraesCS2B02G156700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb185740_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-27667, nbis-gene-9357 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13983 |