Basic Information
Locus ID:
gene-QYE76_023966
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
UBA-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 159950327 | 159951925 | - | gene-QYE76_023966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.55 | 59,324.26 Da | 43.23 | 70.06 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02958 | UAS | 254 | 372 | 4.81734E-36 | - |
| Pfam | PF14555 | UBA-like domain | 8 | 48 | 8.4E-9 | - |
| Pfam | PF13899 | Thioredoxin-like | 259 | 343 | 2.8E-9 | - |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 238 | 371 | 2.68E-23 | IPR036249 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 442 | 531 | 3.88E-9 | IPR029071 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 256 | 373 | 3.9E-26 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 2 | 48 | 6.2E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 448 | 532 | 1.2E-6 | - |
| SMART | SM00594 | 45neu3 | 242 | 364 | 8.4E-9 | IPR006577 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 448 | 529 | 12.991722 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 196 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14570.3 | UBX domain-containing protein. | 0 |
| RefSeq | XP_051196885.1 | UBX domain-containing protein 5-like [Lolium perenne] | 0 |
| Q94JZ8 | Plant UBX domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=PUX7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NS21 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.861, AH07.2773, BH03.985, BH07.2584, CH07.2650 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0138910, gene-QOZ80_2BG0194560 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0117420.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007415, gene-QYE76_023963, gene-QYE76_023966 ... |
| Poaceae | Oryza coarctata | 3 | Oco04G017190, Oco13G005150, Oco14G006110 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g42800.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G208100 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G013060, Chr09G024940, Chr09G024970, Chr15G015460 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG020080, gene_TRIDC6AG036470 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G133200.1.cds1, TraesCS2B02G156700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb185740_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-27667, nbis-gene-9357 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13983 |