Basic Information
Locus ID:
gene-QYE76_023941
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 158973034 | 158973756 | - | gene-QYE76_023941 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 26,321.78 Da | 68.18 | 80.79 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 21 | 73 | 1.19479E-23 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 23 | 71 | 3.5E-10 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 19 | 84 | 1.04E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 112 | 4.4E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 23 | 71 | 6.8E-10 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 23 | 72 | 12.40076 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 38 | 47 | - | IPR017907 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19310.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051193600.1 | E3 ubiquitin-protein ligase RMA1H1-like isoform X2 [Lolium perenne] | 0 |
| Q6R567 | E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453P5W4 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology