Basic Information
Locus ID:
gene-QYE76_023935
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 158875224 | 158877974 | - | gene-QYE76_023935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 67,082.16 Da | 51.84 | 72.11 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 356 | 497 | 1.45946E-49 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 367 | 495 | 1.0E-17 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 374 | 576 | 2.22E-60 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 390 | 422 | 1.3E-31 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 507 | 591 | 6.1E-14 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 375 | 497 | 1.3E-31 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| Coils | Coil | Coil | 145 | 165 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051215001.1 | uncharacterized protein LOC127332710 [Lolium perenne] | 0 |
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A7H4LJA3 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS3303 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_023591, gene-QYE76_023935, gene-QYE76_054768 |