Basic Information
Locus ID:
gene-QYE76_023762
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 153052170 | 153056036 | - | gene-QYE76_023762 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 24,088.35 Da | 72.05 | 52.38 | -0.93 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 38 | 101 | 1.3E-18 | IPR013103 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 218 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047064419.1 | uncharacterized protein LOC124672191, partial [Lolium rigidum] | 0 |
| P10978 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 | 0 | |
| TrEMBL | Q43491 | DNA sequence with open reading frame OS=Hordeum vulgare OX=4513 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030472 |
| Poaceae | Lolium multiflorum | 226 | gene-QYE76_000514, gene-QYE76_000718, gene-QYE76_000828 ... |