Basic Information
Locus ID:
gene-QYE76_023684
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 150123702 | 150140632 | + | gene-QYE76_023684 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 161,822.08 Da | 46.63 | 82.10 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1104 | 1222 | 5.892E-57 | - |
| CDD | cd00303 | retropepsin_like | 564 | 661 | 2.0754E-12 | - |
| CDD | cd01647 | RT_LTR | 871 | 1010 | 1.36779E-35 | - |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1073 | 1171 | 3.7E-34 | IPR041577 |
| Pfam | PF03732 | Retrotransposon gag protein | 264 | 354 | 4.0E-9 | IPR005162 |
| SUPERFAMILY | SSF50630 | Acid proteases | 561 | 669 | 6.0E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 830 | 1205 | 8.67E-110 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 945 | 1016 | 1.1E-22 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 1019 | 1112 | 1.1E-27 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 931 | 944 | 1.3E-20 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 833 | 930 | 1.3E-20 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 545 | 683 | 4.5E-18 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 191 | - | - |
| Coils | Coil | Coil | 1309 | 1329 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019098329.1 | PREDICTED: uncharacterized protein LOC109131614, partial [Camelina sativa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |