Basic Information
Locus ID:
gene-QYE76_023567
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 145501446 | 145508324 | + | gene-QYE76_023567 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 69,653.63 Da | 43.11 | 77.23 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00098 | Zinc knuckle | 570 | 585 | 2.9E-4 | IPR001878 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 393 | 518 | 8.5E-16 | - |
| Pfam | PF02992 | Transposase family tnp2 | 172 | 318 | 3.3E-49 | IPR004242 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 557 | 590 | 1.92E-8 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 537 | 592 | 6.8E-7 | - |
| SMART | SM00343 | c2hcfinal6 | 569 | 585 | 0.0023 | IPR001878 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 570 | 585 | 9.471408 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 565 | - | - |
| Coils | Coil | Coil | 32 | 52 | - | - |
| Coils | Coil | Coil | 499 | 519 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051178440.1 | uncharacterized protein LOC127292932, partial [Lolium perenne] | 0 |
| TrEMBL | Q5W6P3 | Putative polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=OJ1314_A05.6 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030472 |
| Poaceae | Lolium multiflorum | 226 | gene-QYE76_000514, gene-QYE76_000718, gene-QYE76_000828 ... |