Basic Information
Locus ID:
gene-QYE76_023344
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 137368388 | 137372437 | + | gene-QYE76_023344 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 80,771.02 Da | 31.23 | 90.98 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 40 | 334 | 5.12141E-170 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 351 | 654 | 9.00677E-153 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 47 | 329 | 3.7E-8 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 356 | 650 | 2.2E-41 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 39 | 335 | 4.45E-43 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 350 | 654 | 4.71E-44 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 350 | 655 | 1.6E-43 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 39 | 335 | 3.1E-35 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 40 | 335 | 37.203926 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 351 | 655 | 35.95343 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_047082135.1 | glycerophosphodiester phosphodiesterase GDPDL4-like [Lolium rigidum] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | M0WQ79 | glycerophosphodiester phosphodiesterase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology