Basic Information
Locus ID:
gene-QYE76_022828
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 120100848 | 120107846 | - | gene-QYE76_022828 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 80,488.01 Da | 48.22 | 75.97 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 76 | 178 | 7.57377E-14 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 444 | 690 | 1.3975E-124 | - |
| Pfam | PF00989 | PAS fold | 72 | 177 | 2.1E-14 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 439 | 690 | 6.9E-67 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 72 | 173 | 1.74E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 421 | 690 | 1.75E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 77 | 180 | 8.1E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 516 | 717 | 1.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 431 | 515 | 2.1E-29 | - |
| SMART | SM00220 | serkin_6 | 438 | 688 | 2.3E-58 | IPR000719 |
| SMART | SM00091 | pas_2 | 67 | 134 | 3.4E-7 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 72 | 178 | 1.2E-15 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 72 | 136 | 16.026503 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 438 | 700 | 43.763824 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 557 | 569 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 598 | 608 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 512 | 525 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 661 | 683 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 551 | 569 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 617 | 639 | 2.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 59 | - | - |
| Coils | Coil | Coil | 3 | 23 | - | - |
| Coils | Coil | Coil | 683 | 703 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_047081686.1 | probable serine/threonine-protein kinase roco5 [Lolium rigidum] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6YFK6 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology