Basic Information
Locus ID:
gene-QYE76_022431
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Chitinase class I
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 103733362 | 103734436 | + | gene-QYE76_022431 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.79 | 34,625.38 Da | 35.46 | 61.42 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 26 | 65 | 6.58613E-15 | - |
| CDD | cd00325 | chitinase_GH19 | 82 | 312 | 1.40883E-115 | - |
| Pfam | PF00187 | Chitin recognition protein | 27 | 64 | 1.1E-10 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 81 | 312 | 4.6E-134 | IPR000726 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 78 | 319 | 8.72E-110 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 27 | 70 | 1.11E-10 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 86 | 318 | 7.9E-120 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 25 | 67 | 2.1E-13 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 164 | 221 | 7.9E-120 | - |
| SMART | SM00270 | ChitinBD_3 | 27 | 64 | 4.4E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 3 | 319 | 2.9E-125 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 25 | 66 | 10.736661 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 225 | 235 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 37 | 56 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 35 | 43 | 1.2E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 43 | 50 | 1.2E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 50 | 57 | 1.2E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_051227265.1 | basic endochitinase A-like [Lolium perenne] | 0 |
| Q9FRV1 | Basic endochitinase A OS=Secale cereale OX=4550 GN=rsca PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6API9 | chitinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology