Basic Information
Locus ID:
gene-QYE76_022057
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 87746846 | 87757316 | - | gene-QYE76_022057 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 72,331.86 Da | 47.73 | 91.54 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 561 | 622 | 1.11E-9 | IPR012337 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 136 | 252 | 7.1E-6 | IPR021109 |
| Gene3D | G3DSA:3.30.420.10 | - | 556 | 623 | 6.9E-11 | IPR036397 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 553 | 623 | 8.520656 | IPR001584 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| Coils | Coil | Coil | 432 | 452 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020200029.1 | uncharacterized protein LOC109785847 [Aegilops tauschii subsp. strangulata] | 0 |
| Q7LHG5 | Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2 | 0 | |
| TrEMBL | A0A7H4LK19 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS3571 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |