Basic Information
Locus ID:
gene-QYE76_022036
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
strictosidine synthase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 86714183 | 86722409 | + | gene-QYE76_022036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 104,157.39 Da | 52.20 | 86.34 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 313 | 410 | 5.58841E-13 | - |
| SUPERFAMILY | SSF50630 | Acid proteases | 309 | 418 | 6.88E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 580 | 711 | 2.52E-15 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 571 | 731 | 4.1E-19 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 294 | 435 | 3.9E-18 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 784 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 786 | - | - |
| Coils | Coil | Coil | 895 | 922 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051220486.1 | uncharacterized protein LOC127338411 [Lolium perenne] | 0 |
| TrEMBL | A0A5E4GJT7 | RNA-directed DNA polymerase (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B023628 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |