halophFGD

Basic Information

Locus ID: gene-QYE76_022015

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: protein kinase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	85810330	85823045	+	gene-QYE76_022015

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.85	213,857.05 Da	46.21	83.40	-0.39

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd01647	RT_LTR	93	210	7.94278E-41	-
CDD	cd01647	RT_LTR	1326	1521	4.21236E-75	-
CDD	cd09279	RNase_HI_like	443	569	3.12023E-37	-
CDD	cd00303	retropepsin_like	1039	1118	8.87948E-8	-
Pfam	PF17919	RNase H-like domain found in reverse transcriptase	1585	1670	1.1E-28	IPR041577
Pfam	PF13456	Reverse transcriptase-like	446	565	1.3E-18	IPR002156
Pfam	PF17919	RNase H-like domain found in reverse transcriptase	273	377	3.7E-16	IPR041577
Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	1365	1520	4.0E-25	IPR000477
Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	87	199	9.6E-15	IPR000477
SUPERFAMILY	SSF56672	DNA/RNA polymerases	94	404	4.56E-75	IPR043502
SUPERFAMILY	SSF53098	Ribonuclease H-like	442	570	3.67E-19	IPR012337
SUPERFAMILY	SSF56672	DNA/RNA polymerases	1285	1670	3.45E-126	IPR043502
Gene3D	G3DSA:3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	103	135	1.3E-29	-
Gene3D	G3DSA:2.40.70.10	Acid Proteases	1020	1130	1.9E-8	IPR021109
Gene3D	G3DSA:3.30.420.10	-	441	568	2.9E-25	IPR036397
Gene3D	G3DSA:3.30.70.270	-	219	301	2.2E-19	IPR043128
Gene3D	G3DSA:3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	1288	1446	1.6E-67	-
Gene3D	G3DSA:3.30.70.270	-	93	210	1.3E-29	IPR043128
Gene3D	G3DSA:3.30.70.270	-	1386	1521	1.6E-67	IPR043128
Gene3D	G3DSA:3.30.70.270	-	1530	1623	1.6E-27	IPR043128
ProSiteProfiles	PS50879	RNase H domain profile.	439	569	12.816533	IPR002156
ProSiteProfiles	PS50878	Reverse transcriptase (RT) catalytic domain profile.	1324	1528	9.285597	IPR000477
MobiDBLite	mobidb-lite	consensus disorder prediction	584	607	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	584	612	-	-
Coils	Coil	Coil	1770	1790	-	-

Gene Ontology

Molecular Function:

GO:0003676 (nucleic acid binding) GO:0004523 (RNA-DNA hybrid ribonuclease activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G01410.1	Polynucleotidyl transferase, ribonuclease H-like superfamily protein.
RefSeq	XP_048538050.1	uncharacterized protein LOC125516778, partial [Triticum urartu]
Swiss-Prot	P04323	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
TrEMBL	A0A4Y1QSK5	RNA-directed DNA polymerase OS=Prunus dulcis OX=3755 GN=Prudu_003167 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	258	gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... gene-QYE76_001478, gene-QYE76_001545, gene-QYE76_002878, gene-QYE76_003070, gene-QYE76_003084, gene-QYE76_003260, gene-QYE76_003380, gene-QYE76_003557, gene-QYE76_004014, gene-QYE76_004489, gene-QYE76_004871, gene-QYE76_004955, gene-QYE76_005436, gene-QYE76_005535, gene-QYE76_006201, gene-QYE76_006461, gene-QYE76_007007, gene-QYE76_007524, gene-QYE76_008725, gene-QYE76_009080, gene-QYE76_009098, gene-QYE76_009266, gene-QYE76_009363, gene-QYE76_010359, gene-QYE76_010437, gene-QYE76_010499, gene-QYE76_010706, gene-QYE76_010790, gene-QYE76_011006, gene-QYE76_011217, gene-QYE76_011560, gene-QYE76_011586, gene-QYE76_011908, gene-QYE76_012104, gene-QYE76_012416, gene-QYE76_012553, gene-QYE76_013102, gene-QYE76_013636, gene-QYE76_013925, gene-QYE76_014160, gene-QYE76_014218, gene-QYE76_014483, gene-QYE76_014893, gene-QYE76_015012, gene-QYE76_015132, gene-QYE76_015133, gene-QYE76_015203, gene-QYE76_015348, gene-QYE76_015925, gene-QYE76_016314, gene-QYE76_017256, gene-QYE76_018005, gene-QYE76_019073, gene-QYE76_019212, gene-QYE76_019540, gene-QYE76_019587, gene-QYE76_020032, gene-QYE76_020289, gene-QYE76_020547, gene-QYE76_020587, gene-QYE76_020642, gene-QYE76_020651, gene-QYE76_021191, gene-QYE76_021230, gene-QYE76_021549, gene-QYE76_021567, gene-QYE76_021633, gene-QYE76_021832, gene-QYE76_021874, gene-QYE76_022015, gene-QYE76_022057, gene-QYE76_022455, gene-QYE76_022481, gene-QYE76_022541, gene-QYE76_022729, gene-QYE76_022734, gene-QYE76_023212, gene-QYE76_023623, gene-QYE76_023684, gene-QYE76_024107, gene-QYE76_024266, gene-QYE76_024285, gene-QYE76_024368, gene-QYE76_024822, gene-QYE76_024853, gene-QYE76_025082, gene-QYE76_025194, gene-QYE76_025201, gene-QYE76_025558, gene-QYE76_025749, gene-QYE76_027306, gene-QYE76_027479, gene-QYE76_027767, gene-QYE76_027929, gene-QYE76_028306, gene-QYE76_028390, gene-QYE76_028521, gene-QYE76_028627, gene-QYE76_028964, gene-QYE76_029066, gene-QYE76_029253, gene-QYE76_029478, gene-QYE76_029656, gene-QYE76_030047, gene-QYE76_030722, gene-QYE76_030778, gene-QYE76_031152, gene-QYE76_031278, gene-QYE76_031378, gene-QYE76_031418, gene-QYE76_031427, gene-QYE76_031826, gene-QYE76_031863, gene-QYE76_031938, gene-QYE76_032150, gene-QYE76_032272, gene-QYE76_032316, gene-QYE76_032418, gene-QYE76_032799, gene-QYE76_033152, gene-QYE76_033241, gene-QYE76_033522, gene-QYE76_033748, gene-QYE76_034058, gene-QYE76_034449, gene-QYE76_034686, gene-QYE76_034857, gene-QYE76_034978, gene-QYE76_035931, gene-QYE76_035959, gene-QYE76_036628, gene-QYE76_036652, gene-QYE76_037020, gene-QYE76_037135, gene-QYE76_037340, gene-QYE76_037578, gene-QYE76_037745, gene-QYE76_038116, gene-QYE76_038164, gene-QYE76_038172, gene-QYE76_038439, gene-QYE76_038746, gene-QYE76_038763, gene-QYE76_039113, gene-QYE76_040376, gene-QYE76_040465, gene-QYE76_040941, gene-QYE76_041166, gene-QYE76_041319, gene-QYE76_041326, gene-QYE76_041533, gene-QYE76_041618, gene-QYE76_041892, gene-QYE76_041914, gene-QYE76_042072, gene-QYE76_042207, gene-QYE76_042261, gene-QYE76_042491, gene-QYE76_042607, gene-QYE76_042863, gene-QYE76_043045, gene-QYE76_043118, gene-QYE76_043255, gene-QYE76_043288, gene-QYE76_043315, gene-QYE76_043743, gene-QYE76_043904, gene-QYE76_044146, gene-QYE76_044579, gene-QYE76_045336, gene-QYE76_045350, gene-QYE76_045894, gene-QYE76_046083, gene-QYE76_046575, gene-QYE76_047804, gene-QYE76_048450, gene-QYE76_048520, gene-QYE76_048594, gene-QYE76_049456, gene-QYE76_049700, gene-QYE76_049754, gene-QYE76_049810, gene-QYE76_050300, gene-QYE76_050661, gene-QYE76_050837, gene-QYE76_050875, gene-QYE76_050894, gene-QYE76_051097, gene-QYE76_051315, gene-QYE76_051537, gene-QYE76_051884, gene-QYE76_051931, gene-QYE76_051983, gene-QYE76_052387, gene-QYE76_052481, gene-QYE76_052552, gene-QYE76_053300, gene-QYE76_053742, gene-QYE76_054326, gene-QYE76_054387, gene-QYE76_054432, gene-QYE76_055160, gene-QYE76_055429, gene-QYE76_055502, gene-QYE76_055554, gene-QYE76_055717, gene-QYE76_055869, gene-QYE76_056285, gene-QYE76_056306, gene-QYE76_056551, gene-QYE76_057276, gene-QYE76_057462, gene-QYE76_057713, gene-QYE76_058024, gene-QYE76_058417, gene-QYE76_058456, gene-QYE76_058589, gene-QYE76_058992, gene-QYE76_059365, gene-QYE76_059726, gene-QYE76_061144, gene-QYE76_061584, gene-QYE76_062064, gene-QYE76_062079, gene-QYE76_063015, gene-QYE76_063103, gene-QYE76_063472, gene-QYE76_063549, gene-QYE76_063820, gene-QYE76_063894, gene-QYE76_064004, gene-QYE76_064014, gene-QYE76_064184, gene-QYE76_064452, gene-QYE76_064982, gene-QYE76_065099, gene-QYE76_065510, gene-QYE76_065556, gene-QYE76_065773, gene-QYE76_066087, gene-QYE76_066525, gene-QYE76_066734, gene-QYE76_066943, gene-QYE76_067024, gene-QYE76_067129, gene-QYE76_067595, gene-QYE76_067894, gene-QYE76_068030, gene-QYE76_068152, gene-QYE76_068235, gene-QYE76_068869, gene-QYE76_068889, gene-QYE76_069814, gene-QYE76_071652, gene-QYE76_071655