Basic Information
Locus ID:
gene-QYE76_021719
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 75095975 | 75107970 | + | gene-QYE76_021719 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 232,006.70 Da | 36.75 | 96.65 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 434 | 698 | 6.44906E-55 | - |
| CDD | cd01561 | CBS_like | 922 | 1212 | 1.12562E-125 | - |
| Pfam | PF13516 | Leucine Rich repeat | 1695 | 1708 | 0.96 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 1884 | 2061 | 8.5E-29 | IPR000719 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 440 | 698 | 2.3E-38 | IPR000477 |
| Pfam | PF13855 | Leucine rich repeat | 1717 | 1775 | 6.1E-7 | IPR001611 |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 917 | 1207 | 3.4E-60 | IPR001926 |
| Pfam | PF13855 | Leucine rich repeat | 1284 | 1321 | 1.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 1223 | 1259 | 7.8E-6 | IPR013210 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 913 | 1212 | 2.62E-86 | IPR036052 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 376 | 684 | 1.19E-22 | IPR043502 |
| SUPERFAMILY | SSF52058 | L domain-like | 1459 | 1786 | 2.89E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1863 | 2061 | 2.49E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 1250 | 1541 | 7.48E-51 | - |
| SUPERFAMILY | SSF56219 | DNase I-like | 33 | 162 | 3.08E-15 | IPR036691 |
| Gene3D | G3DSA:3.40.50.1100 | - | 957 | 1060 | 4.3E-112 | IPR036052 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1378 | 1479 | 4.4E-24 | IPR032675 |
| Gene3D | G3DSA:3.40.50.1100 | - | 919 | 1212 | 4.3E-112 | IPR036052 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1480 | 1809 | 1.4E-74 | IPR032675 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 17 | 162 | 1.6E-13 | IPR036691 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1867 | 2067 | 4.5E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1221 | 1377 | 4.9E-40 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 1432 | 1456 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1715 | 1738 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1880 | 2080 | 5.6E-10 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 1527 | 1551 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1739 | 1763 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1285 | 1309 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1880 | 2086 | 27.792404 | IPR000719 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 420 | 698 | 18.120667 | IPR000477 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1886 | 1913 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 2011 | 2023 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43750.1 | O-acetylserine (thiol) lyase B. Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. | 0 |
| RefSeq | XP_051222216.1 | uncharacterized protein LOC127340513 [Lolium perenne] | 0 |
| Q00834 | Cysteine synthase OS=Spinacia oleracea OX=3562 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I7BHP3 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology