Basic Information
Locus ID:
gene-QYE76_021689
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 74151249 | 74154445 | + | gene-QYE76_021689 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 52,204.45 Da | 52.92 | 69.63 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 333 | 386 | 3.27198E-7 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 327 | 415 | 6.8E-6 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 291 | - | - |
| Coils | Coil | Coil | 9 | 29 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039838949.1 | uncharacterized protein LOC120699143 isoform X1 [Panicum virgatum] | 0 |
| TrEMBL | A0A2T7EPT1 | Peptidase A2 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G151400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027960 |
| Poaceae | Lolium multiflorum | 225 | gene-QYE76_000112, gene-QYE76_000237, gene-QYE76_000651 ... |
| Poaceae | Oryza sativa | 1 | ChrSy.fgenesh.mRNA.19 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G009620, Chr05G009630, Chr20G008400 |